Bioinformatics Scientist (f/m/x)

We are looking to support our rapidly growing team as soon as possible:

Bioinformatics Scientist (f/m/x)

Institute of Pathology

TV-L: 38,5 h/week (100%)

Limited for 2 years according to WissZeitVG

Your salary will be based on TV-L.

Your tasks

• Pipeline development for the analysis of next generation sequencing (NGS) data sets (RNA/DNA/ctDNA) and integration of the results into routine operations. The focus will be whole genome sequencing in a somatic as well as Germline context.
• Setup of interfaces to databases.
• Occasional establishment of additional bioinformatics infrastructure in collaboration with our IT department.
• Pipeline related support of molecular pathology routine diagnostics.

Your profile

• Completed university education (Master/PhD) in bioinformatics, computer/data sciences, biology or similar subject.
• Knowledge regarding the handling of standard programs for data analysis, e.g. bwa, samtools, GATK.
• Advanced experience in the area of NGS data analyses, preferably with background in tumor biology or human genetics.
• Experience with Linux, preferably with Linux servers and writing Linux shell scripts.
• Knowledge and application of a programming/scripting language in the NGS environment (e.g., Python, Perl, Java).
• Experience with parallelization of data processing on servers, possibly grids/clusters but also general hardware knowledge are advantageous.
• Good teamwork and communication skills but also ability to work independently.
• German language is preferable, but not mandatory.

Our offer

• Everything but ordinary: You can expect a secure job in a challenging, innovative environment - including company pension schemes and regular working hours without business trips.
• Work-life balance: Whether full-time or part-time, with or without children - with numerous support options, we will find the right path together.
• Team spirit in R(h)ine culture: You will be warmly welcomed by an interdisciplinary team that values mutual respect and helpfulness.
• Strong perspectives: We offer extensive training opportunities - so you can continuously grow and set new goals.

Contact

Dr. Jana Fassunke

Tel: +4922147886157

Universitätsklinikum Köln AöR
Geschäftsbereich Personal
Kerpener Str. 62
50937 Köln

Application deadline: 09.03.2025

Job-ID: k1p27lu6

We look forward to receiving your application and getting to know you!