Bioinformatician

Reference number: 2024-0333

Heidelberg

Vollzeit

Single-cell Open Lab

“Research for a life without cancer" is our mission at the German Cancer Research Center. We investigate how cancer develops, identify cancer risk factors and look for new cancer prevention strategies. We develop new methods with which tumors can be diagnosed more precisely and cancer patients can be treated more successfully.

Every contribution counts – whether in research, administration or infrastructure. This is what makes our daily work so meaningful and exciting.

The Single-cell Open Lab at the German Cancer Research Center (DKFZ) is seeking from January 2025 a research scientist to support the analysis of spatial omics data as part of Multispace within the Health and Life Science Alliance Heidelberg-Mannheim (https://www.health-life-sciences.de/multispace/).

Our lab provides lab infrastructure to facilitate both single-cell and spatial omics projects. We work closely with the very active research community in Heidelberg on a variety of research questions. Specifically, we aim to support multi-omics workflows, such as combining spatial transcriptomics, proteomics and metabolomics, by collaborating with other core labs across the campus.

Integration of diverse datasets from the same or consecutive tissue sections will be crucial to build comprehensive molecular maps.

YOUR TASKS

We are looking for a research scientist to:

1. Conduct the bioinformatical analysis of these data, especially for benchmarking new instruments and technology advancements.
2. Build transferable analysis frameworks and data sharing schemes.
3. Support and educate users in running these.
4. Actively contribute to ongoing initiatives such as iofast for FAIR spatial data.

Thus, we are looking for someone with strong computational skills who wants to work in an interdisciplinary team and is willing to learn what is needed on the biology side. The candidate will have the possibility to further shape the theoretical spatial omics work of the lab in an inspiring environment.

YOUR PROFILE

• Master's and PhD degree in systems / quantitative biology, physics, mathematics or computer science.
• Ability to independently solve complex scientific / technical problems.
• Programming skills (e.g. R and Python).
• Experience in complex image analysis, preferably in the field of spatial transcriptomics and proteomics.
• Knowledge in system administration is a plus.
• Interest in molecular oncology.
• Self-motivated and capable to communicate results in an interdisciplinary team.
• Proficiency in English.

WE OFFER

Excellent framework conditions: state-of-the-art equipment and opportunities for international networking at the highest level.

30 days of vacation per year.

Flexible working hours.

Remuneration according to TV-L incl. occupational pension plan and capital-forming payments.

Possibility of mobile work and part-time work.

Family-friendly working environment.

Sustainable travel to work: subsidized Germany job ticket.

Unleash your full potential: targeted offers for your personal development to further develop your talents.

Our Corporate Health Management Program offers a holistic approach to your well-being.

ARE YOU INTERESTED?

Then become part of the DKFZ and join us in contributing to a life without cancer!

Contact: Dr. Jan-Philipp Mallm

Phone: +49 (0)6221/54-51378

Duration: The position is initially limited to 2 years with the possibility of prolongation.

Application Deadline: 05.12.2024

Applications by e-mail cannot be accepted.

We are convinced that an innovative research and working environment thrives on the diversity of its employees. Therefore, we welcome applications from talented people, regardless of gender, cultural background, nationality, ethnicity, sexual identity, physical ability, religion and age.

People with severe disabilities are given preference if they have the same aptitude.

Notice: We are subject to the regulations of the Infection Protection Act (If SG). Therefore, all our employees must provide proof of immunity against measles.